rs51163005 SNP Detail

Summary

• ID
  rs51163005
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr14:64508529 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GAGCT GTTGTAAGAA CTGAAGAAGC
  C
  GCTGGGGTGG GGTGACTTGC AGTGA                                      
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss139627413	ENSMUSSNP1064617	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	C
ss324654915	CHEV_14_64889917	CHEVERUD	SCREENING_POP	f	SNP				C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs51163005					SNP	C	C	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:64508529 () rs orientation: forward

Symbol	Name	Function Class
Gm41176	predicted gene, 41176	within coordinates
Msra	methionine sulfoxide reductase A	Intron
Rr369847	regulatory region 369847	1224 bp upstream
Rr493865	regulatory region 493865	976 bp proximal
Rr493866	regulatory region 493866	1630 bp proximal