rs51164570 SNP Detail

Summary

• ID
  rs51164570
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr16:6803025 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GTGTA CCTGGCCTCC CAAGAACCTT
  A
  TAACTAATGG CCTGACACCA CCCCT                                      
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss147788331	ENSMUSSNP6203554	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A
ss325101891	CHEV_16_6985254	CHEVERUD	SCREENING_POP	f	SNP			A	A
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs51164570					SNP	A	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr16:6803025 () rs orientation: forward

Symbol	Name	Function Class
Rbfox1	RNA binding protein, fox-1 homolog (C. elegans) 1	within coordinates
Rr511178	regulatory region 511178	830 bp proximal
Tssr136955	transcription start site region 136955	1538 bp upstream