rs51166732 SNP Detail

Summary

• ID
  rs51166732
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:67145523 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTTAG GCCAAGAACG CACTGGCCCA
  Y
  GCCCTGCAGT CAGCTCGCCA TGACT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss132326619	ENSMUSSNP4457997	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C
ss323719233	CHEV_11_67068199	CHEVERUD	SCREENING_POP	f	SNP			T	C
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs51166732					SNP	T	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:67145523 () rs orientation: forward

Symbol	Name	Function Class
Myh4	myosin, heavy polypeptide 4, skeletal muscle	within coordinates
Rr449442	regulatory region 449442	711 bp distal
Tssr3528	transcription start site region 3528	36 bp upstream
Tssr3529	transcription start site region 3529	92 bp upstream
Tssr102201	transcription start site region 102201	1179 bp downstream
Tssr102202	transcription start site region 102202	690 bp downstream
Tssr102203	transcription start site region 102203	627 bp downstream
Tssr102204	transcription start site region 102204	231 bp downstream
Tssr102205	transcription start site region 102205	14 bp downstream
Tssr102206	transcription start site region 102206	80 bp upstream
Tssr102207	transcription start site region 102207	724 bp upstream
Tssr102208	transcription start site region 102208	894 bp upstream
Tssr102209	transcription start site region 102209	929 bp upstream
Tssr102210	transcription start site region 102210	947 bp upstream
Tssr102211	transcription start site region 102211	957 bp upstream
Tssr102212	transcription start site region 102212	979 bp upstream
Tssr102213	transcription start site region 102213	1131 bp upstream
Tssr102214	transcription start site region 102214	1487 bp upstream
Tssr102215	transcription start site region 102215	1501 bp upstream
Tssr102216	transcription start site region 102216	1545 bp upstream
Tssr102217	transcription start site region 102217	1699 bp upstream
Tssr108535	transcription start site region 108535	1987 bp upstream
Tssr108536	transcription start site region 108536	643 bp upstream
Tssr108537	transcription start site region 108537	622 bp upstream
Tssr108538	transcription start site region 108538	112 bp upstream
Tssr108539	transcription start site region 108539	69 bp downstream
Tssr108540	transcription start site region 108540	129 bp downstream
Tssr108541	transcription start site region 108541	738 bp downstream
Tssr108542	transcription start site region 108542	899 bp downstream
Tssr108543	transcription start site region 108543	1014 bp downstream
Tssr108544	transcription start site region 108544	1597 bp downstream