rs51168264 SNP Detail

Summary

• ID
  rs51168264
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:87685858 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GTTTC TGGCTGTCAG AACATCTTCA
  A
  TGGCCTTGCT TTCTGTCTGG ACATC                                      
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323773650	CHEV_11_87608534	CHEVERUD	SCREENING_POP	f	SNP	A	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs51168264					SNP	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:87685858 () rs orientation: forward

Symbol	Name	Function Class
Gm11505	predicted gene 11505	532 bp downstream
Mpo	myeloperoxidase	within coordinates
Rr370606	regulatory region 370606	485 bp downstream
Rr453904	regulatory region 453904	1119 bp proximal
Rr453905	regulatory region 453905	1173 bp proximal
Tssr3631	transcription start site region 3631	264 bp downstream
Tssr3632	transcription start site region 3632	230 bp upstream
Tssr3633	transcription start site region 3633	1281 bp upstream
Tssr103978	transcription start site region 103978	1617 bp downstream
Tssr103979	transcription start site region 103979	1587 bp downstream
Tssr103980	transcription start site region 103980	1549 bp downstream
Tssr103981	transcription start site region 103981	1227 bp downstream
Tssr103982	transcription start site region 103982	1204 bp downstream
Tssr103983	transcription start site region 103983	1185 bp downstream
Tssr103984	transcription start site region 103984	1000 bp downstream
Tssr103985	transcription start site region 103985	975 bp downstream
Tssr103986	transcription start site region 103986	961 bp downstream
Tssr103987	transcription start site region 103987	820 bp downstream
Tssr103988	transcription start site region 103988	496 bp downstream
Tssr103989	transcription start site region 103989	217 bp downstream
Tssr103990	transcription start site region 103990	181 bp upstream
Tssr103991	transcription start site region 103991	254 bp upstream
Tssr103992	transcription start site region 103992	275 bp upstream
Tssr103993	transcription start site region 103993	751 bp upstream
Tssr103994	transcription start site region 103994	823 bp upstream
Tssr103995	transcription start site region 103995	999 bp upstream
Tssr103996	transcription start site region 103996	1051 bp upstream
Tssr103997	transcription start site region 103997	1221 bp upstream
Tssr103998	transcription start site region 103998	1328 bp upstream
Tssr109976	transcription start site region 109976	1389 bp downstream