rs51169229 SNP Detail

Summary

• ID
  rs51169229
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:91191335 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGAGACAAAG CAAGTCTGGA
  CTTGGAGGGG GGATTCCCTT CGTGCACACA GCTTCAGAAG TGCCAATGGT GCCTGCAAAG
  CCTACTTTGT GTGCTTTAGT CAAGAAAATT CACCATATCA GATTTTTGAG AAGTGGTGAT
  CTGAAGCCCT TTAGGTGCTA TAAGTCCAGA AAAGTCGCTT TGGACCCGCC AACTTACTTC
  Y
  TTCCCATTCC CACCACATAC GAAAGTTTCC AGAAATGTCT TTAAAATCAG AGCAGGGGGG
  TGGGGGTGGG GGAACAGGGC AGGAATCCTT GGCTTCAACA GCCAGCTTCA AAGAATTCAG
  TGTGCTAGGA ACAGCAGCCA ACTGGGTGCA GCTAGTTGCA CCCAGCCAGC CCTGCACCAA
  AGCCAGAGAA CAAAGATGAA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
ss146924401	ENSMUSSNP6852968	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T	T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
rs51169229					SNP	T	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:91191335 () rs orientation: forward

Symbol	Name	Function Class
Cstpp1	centriolar satellite-associated tubulin polyglutamylase complex regulator 1	within coordinates
Rr373536	regulatory region 373536	within coordinates
Rr560718	regulatory region 560718	within coordinates