rs51173837 SNP Detail

Summary

• ID
  rs51173837
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:113368470 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TATAC ACAACCTTGG CTTTATTATT
  W
  ATCCCCAAAG ACTTTACGCC ACCTG                                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss133564683	ENSMUSSNP247055	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs51173837					SNP	T	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:113368470 () rs orientation: forward

Symbol	Name	Function Class
Arpc4	actin related protein 2/3 complex, subunit 4	1061 bp downstream
Cpgi17842	CpG island 17842	658 bp proximal
Rr636505	regulatory region 636505	531 bp proximal
Tssr58207	transcription start site region 58207	793 bp downstream
Tssr58208	transcription start site region 58208	908 bp upstream
Tssr58209	transcription start site region 58209	1001 bp upstream
Tssr58210	transcription start site region 58210	1553 bp upstream
Ttll3	tubulin tyrosine ligase-like family, member 3	within coordinates