rs51175188 SNP Detail

Summary

• ID
  rs51175188
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:30851246 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GCTAA AATGCAGTTT CGTGACACTC
  M
  TTCCTTTTAT TTCTGGATGT GACTG                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss139233868	ENSMUSSNP1792761	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs51175188					SNP	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:30851246 () rs orientation: forward

Symbol	Name	Function Class
B930019K04Rik	RIKEN cDNA B930019K04 gene	570 bp downstream
Nt5dc2	5'-nucleotidase domain containing 2	1800 bp upstream
Rr404046	regulatory region 404046	147 bp downstream
Rr489957	regulatory region 489957	within coordinates
Rr489958	regulatory region 489958	65 bp distal
Rr489959	regulatory region 489959	1274 bp proximal
Rr489960	regulatory region 489960	1606 bp proximal
Tssr124915	transcription start site region 124915	1764 bp upstream
Tssr124916	transcription start site region 124916	1790 bp upstream
Tssr124917	transcription start site region 124917	1826 bp upstream
Tssr127917	transcription start site region 127917	366 bp upstream
Tssr127918	transcription start site region 127918	329 bp upstream
Uqcc5	ubiquinol-cytochrome c reductase complex assembly factor 5	352 bp upstream