rs51176792 SNP Detail

Summary

• ID
  rs51176792
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:125924760 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCTGATGGTA AGTCCCCAGG
  TCCCTGTAAA GACTTTACAG TTGGTTTCAT TTTGTTATGC TACAAAATGA CTTAAACCGA
  CTTTTCTAGG CTGCATGTCC TGACTAGTCT ATGTTGCTAT GGTTATTTTA TGCCGCTGAC
  GCTCTGGGTC CCTTTGTCTG CGTGGAACGA GTCTCTGGGG CAGGTGGGCA AGGTGTTGGC
  R
  GGTGACAGAC AGACCAACAC ACAAGATTGT GTAGAATATG AATGTATTTT GTCAGGTCGA
  GCATCAAACT TTTTATACCG AAGAAATAAC AAGAAACCAG GCAAAATACA ATCCACCAAG
  TTACAGTGAC CCAATACATA AGGAATGTAT ACATCAAAAG AAGGCGGGGA CCAGGCTGCT
  GCCGAAAAGA AGGGAGCCAG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss145872445	ENSMUSSNP142675	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs51176792					SNP	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:125924760 () rs orientation: forward

Symbol	Name	Function Class
D7Csu3	DNA segment, Chr 7, Central Connecticut State University 3	within coordinates
D7Csu4	DNA segment, Chr 7, Central Connecticut State University 4	179 bp distal
Rr153599	regulatory region 153599	1360 bp distal
Rr153600	regulatory region 153600	41 bp proximal
Rr381445	regulatory region 381445	within coordinates
Tssr69016	transcription start site region 69016	1596 bp downstream
Tssr74630	transcription start site region 74630	656 bp upstream
Tssr74631	transcription start site region 74631	1619 bp downstream