rs51178911 SNP Detail

Summary

• ID
  rs51178911
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:75555661 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGCTGGGCAA AGGGGAAAAA
  TAAAGAGTAG CTTTACTAGG GGCAAGTTAC AAAGTAGGGC TGGACAGAGG AAGGCAAATG
  GCTTTGGGGA TGAGTGCTGT TACAATAGGA GGAGTGCAAC CCCAGTCCCG GGCAAGTGGA
  AACAGAAGCC CAATGTCACC CTCAGCTACA CAGAGGCCAG CTTAGGCTGT AGGAAACCTC
  R
  TCCCAAACAA ACAAATGAAT GGATTAATGT ACATACTCAC GTTTTCCTGG CAGGGTTTTG
  AGGGATAAGC TGCCATGGGT CACAGTAGAC AGACTTAGCT CTGTACCATG TATTGGCTAT
  GTACTTAGTT CAGCCTGTTT CCATACACCG TGTAATCACA GCGTGGCTCG GTTTCAGCCT
  CAATGCCATC CTGGCTTTTT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss144696870	ENSMUSSNP2119383	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs51178911					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:75555661 () rs orientation: forward

Symbol	Name	Function Class
Gm69448	predicted gene, 69448	988 bp upstream