rs51179533 SNP Detail

Summary

• ID
  rs51179533
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:185416568 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GAATGTCCAC CCCCTTCTGT ATGTATGTGA ATACATTCAT
  GTGTGTGCAC AGTGTCCAGG TATGGTGGAG GTCAGAGATC ACCCCTGGGA ATCTTCTTCA
  G
  TCACTTTCTA CTTTATCTTT TGAGACAGAG TCTCTAACTG AACCTGTAGC TCATGTATTT
  GGCTGGCCTA GGTGGCCACC GAGCCCCAAC GAGCCTCTT                       
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320178628	CHEV_1_187508250	CHEVERUD	SCREENING_POP	f	SNP	G	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs51179533					SNP	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss146440064	ENSMUSSNP6588322	ENSEMBL	ENSEMBL_Sanger	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:185416568 () rs orientation: forward

Symbol	Name	Function Class
Rr425420	regulatory region 425420	1811 bp distal
Rr425422	regulatory region 425422	427 bp proximal
Rr425423	regulatory region 425423	615 bp proximal