rs51183671 SNP Detail

Summary

• ID
  rs51183671
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:84373637 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CTCCCCAACT AGAACACAGC ACAGCGATCT TCATTTGTGG
  CTGTTCTCTG CCACTGAGAA TCACGCCAGG CACCGAGTAA GTGCTCGGTG TATATTTTCC
  R
  TGAAAAACAG AATGAAGTTC TGCTGATCGT GTTGAACACC TTTAATCCCA GCACTCAGGA
  GGCAGAGACA GGTGCAATCC TGAGTTCAAG GCCAGCCTG                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss146129377	ENSMUSSNP3389639	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs51183671					SNP	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:84373637 () rs orientation: forward

Symbol	Name	Function Class
Cpgi9563	CpG island 9563	886 bp proximal
Gm35551	predicted gene, 35551	within coordinates
Gm65795	predicted gene, 65795	within coordinates
Rr531969	regulatory region 531969	1924 bp distal
Rr531970	regulatory region 531970	895 bp proximal