rs51184962 SNP Detail

Summary

• ID
  rs51184962
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  127
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:44774182 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        ATACAACTTA TAACATAGCC TCAGTGCAAT TTTATATATT
  TGTATATAAC CTAATACAGG GAACAACGTG TCATGGTGTG AGATGACCAT ACCAGTGCTT
  W
  AAAAAAAATG CAGATTTTGG ATTATTCTAG ATTTGGAATT TTTGGATTAA CGGTACTAAA
  CCTGTATCAG ACTAGGGGAC TTAAGTCATA GAAATTTAAT                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	AKR/J	BTBR T<+> Itpr3/J	C3H/HeJ	MOLF/EiJ
ss61783515	NES17517295	PERLEGEN	MM_PANEL2	f	SNP	A	T	A	A	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	AKR/J	BTBR T<+> Itpr3/J	C3H/HeJ	MOLF/EiJ
rs51184962					SNP	A	T	A	A	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss61783515	NES17517295	PERLEGEN	MM_PANEL	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:44774182 () rs orientation: forward

Symbol	Name	Function Class
Gm40931	predicted gene, 40931	within coordinates
Gm47805	predicted gene, 47805	1476 bp upstream
Rr283673	regulatory region 283673	1220 bp proximal