rs51185538 SNP Detail

Summary

• ID
  rs51185538
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:91858471 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        ATCTGAGTTC GAGGCCAGCC TGGTCTACAG ACTGAGTTTC
  AGAACAGCCA GGGCTATACA GAGAAACCCT GACCTGGGGG GGGGGGGTAT ATACCTGTAT
  S
  AGGAAAAGGG AGTAGAGTCC TGTCCCTACT ACTCCAAGAA ACTGCCCTTT AAGGAAAAAA
  AAAGAAAACA AAAACTCACT ATGTGGTCCA GGTTAGTCA                       
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss145564007	ENSMUSSNP4638528	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	C
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs51185538					SNP	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:91858471 () rs orientation: forward

Symbol	Name	Function Class
Aktip	AKT interacting protein	within coordinates
Cpgi20808	CpG island 20808	1575 bp proximal
Rr667489	regulatory region 667489	1248 bp proximal