rs51187253 SNP Detail

Summary

• ID
  rs51187253
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:119954610 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

             ACTGTCCCCA GCCACCACCC ACATGCCCGA GAGATGAGAC GGTCAGCCTC
  R
  GAGCAGAGCC CCAATGTGCC CCATTCCTCA CACATGACTG AGACCCGAAG           
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	MSM/Ms
ss147340970	ENSMUSSNP1453640	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	MSM/Ms
rs51187253					SNP	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:119954610 () rs orientation: forward

Symbol	Name	Function Class
Hivep3	human immunodeficiency virus type I enhancer binding protein 3	within coordinates
Tssr38767	transcription start site region 38767	840 bp downstream
Tssr38768	transcription start site region 38768	207 bp downstream
Tssr38769	transcription start site region 38769	310 bp upstream
Tssr38770	transcription start site region 38770	487 bp upstream