rs51190215 SNP Detail

Summary

• ID
  rs51190215
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:83404377 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GATGATGGAA GAAATGTCAA
  AAACCTCAGT CAGCTGGAGG TGGTCAATAG AAAGGAAAGG GAAGACTCAG GACACTGCCA
  CCATCAGAAC ACTTGCCATT CACTGTCTTT TCTTCTTTGT GTTGTTGATC CATGCTTTCT
  AAGATATGAA GTCTCCAGCC TCATGGATGA AGCCTGACTA TTGGACCATG TAAAAATCAG
  R
  TAGCCCATCA CCTTCCTTCT GCATCTGTGT GCAAGCACAC ATATGTTAGT ATACACATAA
  AGAGAGCTAT ACAAATGAAT AACTAAGTTG GGCAGAATAG AGTTTTAAAG CTTATGAGTT
  AAATTTAGTA ATAAAATGCT CACCAATAGT TATTATATCA AACAATGCAG AACACAATTT
  ATTTAAATAA ATATCTTCTA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss60760697	NES16400717	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	G	G	A	G	G	A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs51190215					SNP	G	G	G	G	G	G	G	G	G	G	A	G	G	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss60760697	NES16400717	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:83404377 () rs orientation: forward

Symbol	Name	Function Class
Gm37989	predicted gene, 37989	within coordinates
Gm69621	predicted gene, 69621	within coordinates