rs51198184 SNP Detail

Summary

• ID
  rs51198184
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:15727997 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      C CAAGTTATTT TATATAATTT GTGATATTGT GAAAGGTGTT
  CTTTCCCTGC TTTCTTTCTC GGCATGTTTA TCCTTGAGCT TTAGTAAAGT TTCTTTTATG
  R
  ATGTGGAATA TGTATCATAG ACATTCAGAA TTGATAGTTC ATCTTGGTAG ATTTTACCTT
  TGATAAGTAT CCCTCCAGTC TCCTGAGAGG TTCTACCACA G                    
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J
ss147906230	ENSMUSSNP5436787	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A
ss147936627	ENSMUSSNP4503443	ENSEMBL	ENSEMBL_Sanger	f	SNP		A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J
rs51198184					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:15727997 () rs orientation: forward

Symbol	Name	Function Class
Gm21190	predicted gene, 21190	1457 bp downstream
Gm21847	predicted gene, 21847	within coordinates
Rr607454	regulatory region 607454	214 bp distal
Rr607455	regulatory region 607455	327 bp distal