rs51207448 SNP Detail

Summary

• ID
  rs51207448
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:100142896 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CCTCG ATGTTCCCAG CCTGACCCGG
  R
  CGGGGTGGGG GAAGGGGCTT TCACG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss145533124	ENSMUSSNP1567761	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs51207448					SNP	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:100142896 () rs orientation: forward

Symbol	Name	Function Class
Cpgi19484	CpG island 19484	within coordinates
Gm72028	predicted gene, 72028	440 bp upstream
Rr400469	regulatory region 400469	240 bp downstream
Rr652131	regulatory region 652131	670 bp distal
Rr652132	regulatory region 652132	1249 bp distal
Rr652133	regulatory region 652133	342 bp distal
Tssr68123	transcription start site region 68123	365 bp downstream
Tssr68124	transcription start site region 68124	319 bp downstream
Tssr68125	transcription start site region 68125	81 bp upstream
Tssr68126	transcription start site region 68126	140 bp upstream
Tssr68127	transcription start site region 68127	250 bp upstream
Tssr68128	transcription start site region 68128	355 bp upstream
Tssr68129	transcription start site region 68129	580 bp upstream
Tssr68130	transcription start site region 68130	1202 bp upstream
Tssr73743	transcription start site region 73743	1988 bp downstream
Ucp2	uncoupling protein 2 (mitochondrial, proton carrier)	within coordinates