rs51214302 SNP Detail

Summary

• ID
  rs51214302
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:119912076 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TTAAAGTAAA CTGCCTCTAA ATAATATATT AAAACCATTT
  TATCTTAAGA TATTTTAAAT AACTATGTTA TTAAACATAA TGAATATTTT CCTTCCAAAC
  R
  GGATATTATA TAAATGAGCT AATGCACAAA TGCAAAAACT TTTGGATCAT CTCAAAGAAA
  GATCAGCCAT ATTGATCTAG TCATTACTAT AAATAATGT                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J	LG/J	SM/J
ss138915091	ENSMUSSNP881451	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A
ss324207704	CHEV_12_121186814	CHEVERUD	SCREENING_POP	f	SNP			A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J	LG/J	SM/J
rs51214302					SNP	A	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:119912076 () rs orientation: forward

Symbol	Name	Function Class
Cpgi5238	CpG island 5238	1591 bp distal
Rr474318	regulatory region 474318	1921 bp distal
Tmem196	transmembrane protein 196	within coordinates