rs51214955 SNP Detail

Summary

• ID
  rs51214955
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:25953806 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAATTGTGGG ATTGGAACGG
  AAAGACAATT CAGTATCATC AAATTACAAG TTGAGAGGCT GTATTAAGAC ACTGCTTGAA
  GTGAAACACT TCTCTCACAG AAAACTAAAA TGGATTTTAC AAGGAGTTTT TAACATTCAC
  TAAGCATCCT AATTAACCTT TGTCAGGTAG AATTAAAGCA ACCAAGAAGT TTAACAGAAT
  Y
  CAAAGACATG CAGTTGGCGG TGGCATTTTC ATCCCAAGTC TCCAGCAGAG GGTTTGTTAT
  TTTTCCAGGG TAATTTTATT GTATGGGGAG GAAAGGAAGG GTCGGTTTCA TTTTAAACCA
  AACATGGCTC CACCTGGAAC AAGAGGAAAC TTTGCCCTGC CAGAGGATCA TAGATATATT
  CTAAGTAGTA TTATAAATTT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss60978856	NES16140097	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	T	C	C	C	T	C	C	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs51214955					SNP	C	C	C	C	C	C	T	C	C	C	T	C	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss60978856	NES16140097	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:25953806 () rs orientation: forward

Symbol	Name	Function Class
Vmn1r-ps86	vomeronasal 1 receptor, pseudogene 86	699 bp upstream