rs51218166 SNP Detail

Summary

• ID
  rs51218166
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:102604876 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACACAATAAG TCTCTGGACC
  TAGATGCATG GCTTACATCA ACTGACAGCT GACCCCAATG TCATCCCAGT GGATGGTGCA
  GAGCCCAAGC TATGCTCACA TGCAGGACAG AATAGGGTAC TTCATACATC TAGAGGGTGA
  TGGGGCTTTA TGAGGCCAAA AAGTCTTCCT CTCTCCCATG TGAATGCCTT CTTCTCACTG
  R
  TGAATAATAA AAAATTCAGC AAGACCATAT AACTTTAATT TTTGTTAGAT AACAAAAACA
  TATATTACTG GACTTTTCTG TATTTAGAAG TATGTGAACT TCTCTTCTTG CCAAAACACT
  GAAGCAGATA AGAGGCAGTA AAGAGAGAAA TAAGTACAAT AAAAATCTTA CACAGTAAAG
  ACTACAAACT TTAGCTGAAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	AKR/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ	WSB/EiJ
ss61961470	NES17118818	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	G	G	A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	AKR/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ	WSB/EiJ
rs51218166					SNP	G	G	G	G	G	G	G	G	G	G	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss61961470	NES17118818	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:102604876 () rs orientation: forward

Symbol	Name	Function Class
Gm41045	predicted gene, 41045	965 bp downstream