rs51238147 SNP Detail

Summary

• ID
  rs51238147
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:41375708 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TGTTACTATA ACAAGTTCTG ATTGTATTCC TTTTTAGTCC
  AACTCTTATG GAATTCTGCA CCGAGGCCTG ACTATTGTCT TGAGAATGTT TAGTTCTCAA
  S
  TGTCTTATTT ACTTCCTCAT TTCTGGGATA AAATACCTCA ACAAATGTAA CTTAAAAAAG
  AAAGTACTGA TTTTGGCTCC CAGTCCCAGA ACTACAATC                       
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	MSM/Ms	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss52384916	NES15380833	PERLEGEN	MM_PANEL2	f	SNP	G		G	G	G	G	G	G	C	G	G		G		G	G		G
ss137658797	ENSMUSSNP3134942	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	G						C					G
ss324016152	CHEV_12_42052296	CHEVERUD	SCREENING_POP	f	SNP												C					G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	MSM/Ms	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs51238147					SNP	G	G	G	G	G	G	G	G	C	G	G	C	G	G	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss52384916	NES15380833	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:41375708 () rs orientation: forward

Symbol	Name	Function Class
Gm47376	predicted gene, 47376	within coordinates
Immp2l	IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae)	within coordinates
Rr387110	regulatory region 387110	within coordinates