rs51241634 SNP Detail

Summary

• ID
  rs51241634
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:73358571 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACAGGTTTTC ACTGGCATGG
  GGCCAATCCT CTTGCTTAGG TATCCGTTCA CAAGGCATAT TTGCTCCCTT TGGCTTTTTA
  ATTTATTAAT TGATTGAATG ATTAATTAAT TAATTAATTT CTTAGGACAG GGTTTCTCTG
  CTGGCTGTCT TGGAACTCAC CCTGTAGACA AGGCTGGGCT TGCCACCTGG CTCTTAGTAG
  S
  TTTTTTTTTT TTTTTCCTTT CTCGGTGTAC AGTAGAAGTA GGTCAGGGTC AGTGGCAGAG
  GACAACTTGA GGGAGTTGGT TCTCTGATCA TGTTGTAGGT TCAGGACATT AAACTCAGGT
  TATCAGTTAG GTGGCAATTG TTTTTTTTCC CACTGAGCCA TCACCCCAGC CTGGCATGGG
  TTGATTTGGC ATGGCCAGCC                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss148110613	ENSMUSSNP6974430	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs51241634					SNP	C	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:73358571 () rs orientation: forward

Symbol	Name	Function Class
Gm63120	predicted gene, 63120	within coordinates
Rr504083	regulatory region 504083	224 bp distal
Tssr4621	transcription start site region 4621	1100 bp upstream
Tssr4622	transcription start site region 4622	1162 bp upstream
Tssr131529	transcription start site region 131529	1112 bp upstream
Tssr134702	transcription start site region 134702	546 bp downstream
Tssr134703	transcription start site region 134703	586 bp downstream
Tssr134704	transcription start site region 134704	601 bp downstream
Tssr134705	transcription start site region 134705	613 bp downstream