rs51244762 SNP Detail

Summary

• ID
  rs51244762
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:121277086 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTCAGCACAA GCAACTCAGA
  AGGTTTTAAA CTCAGGAGTA GCTATAGTTA AGAGTTAGCC AACACTGAAC TCATTTTTTT
  TTTTCTGAGA CAGGGTTTCT CTGTGTAGCC CTGGCTGTCC TGGAACTCAA TCTGTAGACC
  AGACTGGCCT TGAACTCAGA GATCCGCCTG CCTCTGCCTC CCGAGTGCTG GGATTAAAGG
  Y
  GTGCTGCCAC CAATGCCTGG CTCTGAATTC ATTTAAATAC TGCATGAATA CTGAGCACCG
  GTATTAGATC TACAAAATGA AACTGAGCGT TCCAAACCTC TGAAGTATGG AAATTGCAAA
  GTGGGCTACA AAACCCGGAC ATGGAAGAAG AGAGTGGAGC ATGAAACCGA GAGTGGAGCA
  TGAAGCCGGG AAGACCGCAT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	MSM/Ms
ss132911592	ENSMUSSNP4507826	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	T
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	MSM/Ms
rs51244762					SNP	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:121277086 () rs orientation: forward

Symbol	Name	Function Class
Cpgi4344	CpG island 4344	1269 bp proximal
Mir7236	microRNA 7236	885 bp downstream
Rab40b	Rab40B, member RAS oncogene family	within coordinates
Tssr112458	transcription start site region 112458	1926 bp downstream