rs51247617 SNP Detail

Summary

• ID
  rs51247617
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:145656703 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGACCCCTCC CCCAACCCCC
  ATGATGCTTT CTTCTTCACC CGCCCCTTGC CTTATCTTTG AAACATTTTC TTATGAATGA
  AATTCTCCCA GTTACTGAAG TCGCGATAAA AGCCCCTCCT TAATTGCCCC GACCGGAATG
  GAAACAGCAG TGTGTTTGTA ATGGCTTCCC TGCCATTACA GTGTTATCAT GTTGGTTTAC
  G
  GGACAGCAGT GTATACTTAA AAATCACAAT TATTACAATA TAAAAGTAGG TGAAATAGGT
  TTAAATTTGC TCTTTTATTA ATACAGGGAC TCAATGTGTA GCTCATCACG GCCTCAAACT
  TCCTTTGTAG CACAGGTTGA CCTCAAACTA GGAATTCTCC TGCCTCAGCC TCTCAATGCT
  TAGTAAGCAT CCTAGCTCAG                                            
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321009190	CHEV_3_145613912	CHEVERUD	SCREENING_POP	f	SNP	G	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs51247617					SNP	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss136040873	ENSMUSSNP4281635	ENSEMBL	ENSEMBL_Sanger	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:145656703 () rs orientation: forward

Symbol	Name	Function Class
Rr586881	regulatory region 586881	within coordinates
Rr586882	regulatory region 586882	332 bp proximal
Rr586883	regulatory region 586883	1714 bp proximal