rs51250925 SNP Detail

Summary

• ID
  rs51250925
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:172850717 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTAGTAATTC CACAGTGAGG
  AGATCCACCT TGAGAAAAGT GCATGGTGGG GGCTGACACT CACTGCATGT TGGAACATAC
  CTGACCAAGC ATGACTGCCC ATCCTGTAGC CCCAGGTCGG AAGGCAGAGG CAAGGACAGT
  CTCTGTGAGT TCTAAGCTAG CCTGGTCTAC AGTAGGAATT CCAGGCTTGC AAGAGCCACA
  M
  GGTAAGATCC TGTCTTAACA AAGGAAGGAA TGAAAGAGAC AGGAGGTGTC AAGACAGGAG
  GAAATCACTA AGATCATATG ACGGGGTGGA GGTGACCATC CATTCTCACT GGTGACTCGT
  GTACTTTCTG AATGTCCATA CTTTATAGTT TAAAAACTGT AAAGCACATA GTGACAAAAG
  CCTGGAACTT AGGATGCACC                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	MSM/Ms
ss148328132	ENSMUSSNP1918005	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	C
SNP Consensus Information
SNP					Consensus Type	A/J	MSM/Ms
rs51250925					SNP	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:172850717 () rs orientation: forward

Symbol	Name	Function Class
Rae1	ribonucleic acid export 1	within coordinates
Rr374300	regulatory region 374300	853 bp upstream