rs51253818 SNP Detail

Summary

• ID
  rs51253818
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:164475457 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGCTGACCCC CAACCATAAA
  ATTATTTCAT TGCTACTTCA TAACTATAAT TTTGCTAGTT ATGGGTTGTA ATGGAAACAT
  CTGTGTTTTC TGATAGTCTT AGGAGACCCC TGTGAAAAGC TTATTCTACC CACAAAGGGT
  CAGGACCCAC AAGTTGAGAA CCACTGCTTT AGACCATTCC AACCAGCAAA GCTAAAATCA
  K
  ATACCCAGGG GGACTCCCAA CCCACATCTT TGAGTACTAA TCTTCTGAAG CAAATTAAGC
  AAGACAGCCA TCAGCCCTGG ATGCTCCCTG GTGCACTGGA GGGGAGATGA GTGTACTGTC
  CACCAGCATT GCCCTCACTG AGTTCTTTCT AATTGCTCAA CAGAAAACAA CCTGTGACTT
  TGCCTAAAGA AATCGCCTCA                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss148229583	ENSMUSSNP461673	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	T	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs51253818					SNP	G	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:164475457 () rs orientation: forward

Symbol	Name	Function Class
Rr40355	regulatory region 40355	1744 bp proximal
Rr52775	regulatory region 52775	1726 bp proximal
Wfdc16	WAP four-disulfide core domain 16	1170 bp downstream