rs51256397 SNP Detail

Summary

• ID
  rs51256397
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:139532736 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TTGAGTAGGA AAACGCCCTG GGTCTTAGAA AATGCATGAA
  GCAAGCCTGA GGTGTCTTGA TGCCTGCTGC ATCCTGGAGA AAGGGAAGGG GCAGGTGTGT
  R
  GAATGTTCCC AGCTGATGGT CCTGTGATAA GGAGACAGAT GTTCCTTCAG CCTCTCTCAG
  CATCTGAAAA TTTTCAAAAT GAAAGAAAAA AATTTCAGA                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss133918630	ENSMUSSNP3487931	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A	A
ss322020283	CHEV_6_139504259	CHEVERUD	SCREENING_POP	f	SNP				A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs51256397					SNP	G	A	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:139532736 () rs orientation: forward

Symbol	Name	Function Class
4930404I20Rik	RIKEN cDNA 4930404I20 gene	within coordinates
Gm67453	predicted gene, 67453	1978 bp upstream