rs51258162 SNP Detail

Summary

• ID
  rs51258162
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:45512403 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATAGGACAAT GTGGACAGTG
  AGGTCACAGT GTGGACAGGG AGGTCACAGT GTGGACAGGA CTGTCCTTGC CCCATGCTGC
  TACATGCTCT GGTGCCCTCC TCCTGGGAGA GCAGTTCGGT TCCTAAAGGA AAAACTGTCT
  TGGTATCTAC ACAACAGGAC CTGATGCACA CACAGCAGGA ACTGGAGTGG GGGGCAGGGT
  R
  TAGGACTGGA AAAGGGGTTC AGGAGAAGGG AGCAGACTGG GGACAGGATG GATGACATGA
  CACCGATGTG GGAAATGAGA ACAGAAACCG TCCCAACTGG TGGGAGATAC CTGCCTTGCC
  TGACAGCAGT GTCTGAGTTC TGTGATGGGG GTCATCAGAT GAGACAGAAA GTTTGCAAGC
  TATGGGAAAG GGGAGAGAAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss136415410	ENSMUSSNP4122568	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs51258162					SNP	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:45512403 () rs orientation: forward

Symbol	Name	Function Class
Dscaml1	DS cell adhesion molecule like 1	within coordinates
Rr195123	regulatory region 195123	198 bp proximal
Rr200398	regulatory region 200398	1603 bp distal
Rr200399	regulatory region 200399	within coordinates