rs51258558 SNP Detail

Summary

• ID
  rs51258558
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr18:81350503 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAAAGATTAC CCTGTGTGTA
  TGTGCCTAGT GACCATGGTC GATACCTTAT TCTGTAATAG CAAAACCCTG GTGTCATTGT
  ACATAAGTGG GAAGGAAGAA CAGCCTTCCA ACCCTAGAGT TTCAAGCATT ACAGAGAACG
  TGAAGCACAG GCTATGACTC TTCCTTAGTC AGGAGACTAT GTGAGGGTTG GTGGGGCCAC
  S
  ACAATTCTGC TCACCTCAGG ATCTGAGCTC AGCTTGGGTC TTGCAGTGAT GAACCACCCA
  GAGTCCTCAC TGTCAGTGAG GACCAGAACA TTGGAGTTCG GTGCATAAGA TAAACCCTCT
  GGGCCAACTA TAGGATACAC CAGGGAGAGA ATGGAGGGAC TGCTGAAACA TGGAGATGCC
  CAAGAAGGTC TCTGAAGAGG                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss63202823	NES17465540	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	C	C	C	C	G	C	C	G	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs51258558					SNP	C	C	C	C	C	C	C	C	C	C	G	C	C	G	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss63202823	NES17465540	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr18:81350503 () rs orientation: forward

Symbol	Name	Function Class
D18Mit127	DNA segment, Chr 18, Massachusetts Institute of Technology 127	766 bp distal
Gm30192	predicted gene, 30192	within coordinates