rs51261507 SNP Detail

Summary

• ID
  rs51261507
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:109711550 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      A CCTAGAGTCT CAAGGACCCC AGAAAGTACC TGATCACACC
  CAGTAGGAGC CTTTGAAAGA CAGGCTATAG ATTTTTGGTA TTTAGTAAGG CTCCCCAGGG
  K
  GGCAAAGAGC TCTTTCTGAT TGGGCTTGCT CCCCATTGGA GCAAGTAGCA CCCTCACCCT
  GGCAACTCCA CCCTGCATGC TTTTTCTCCT CTTCTGGGCC T                    
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss138683859	ENSMUSSNP4580348	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs51261507					SNP	T	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:109711550 () rs orientation: forward

Symbol	Name	Function Class
Gm54371	predicted gene, 54371	1879 bp upstream
Mir369	microRNA 369	1620 bp downstream
Mir409	microRNA 409	1880 bp downstream
Mir410	microRNA 410	1321 bp downstream
Mir412	microRNA 412	1748 bp downstream
Mirc7	microRNA cluster 7, including Mir382 through Mir3072	within coordinates
Mirc36	microRNA cluster 36, including Mir379 through Mir3072	within coordinates
Mirc46	microRNA cluster 46, including Mir409 through Mir410	1321 bp distal
Mirg	miRNA containing gene	within coordinates
Rr472795	regulatory region 472795	658 bp proximal
Tssr115184	transcription start site region 115184	1327 bp downstream