rs51263651 SNP Detail

Summary

• ID
  rs51263651
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:36786848 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTGTTTTGCC TTCTGGAGCA
  AGTCCGTTTT TAAAAGCAGT CCTATTTAGC GGACTCCAGG CAGCCTCTCT CCTGCTCCAA
  CCCCCTCCAC GTACTGCAGG CTACCAGAAA AGTGGCTTTG GGGGGTAGGC ACACTGCACC
  AGAGACCCTT TGGAGAAAAC CACAGGGTAT CTTGCACTTA CTTTGGCTTG CAGAGGTCCT
  S
  GCTGACTAGC TGGCTGCCTT TGTTGCAAAG TGCGGGCGAG GTTTCTGCAG ACTCCAGGTA
  TCGCTGGCTG ATGCTCCTGC CTGGGCGGCT GCGCTCTGCT CTCCCCCCTT CTGGATGGAT
  GACTCAGTGC TTTCTTTCTT CCCCTCTCTC CACTTTGGGT TTTCTTGTGC TCTGGGGCTT
  CCTTGGCGGG ATATTTGGAC                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss133122058	ENSMUSSNP21256	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs51263651					SNP	G	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:36786848 () rs orientation: forward

Symbol	Name	Function Class
Gm53282	predicted gene, 53282	1213 bp downstream
Ptn	pleiotrophin	within coordinates
Rr146140	regulatory region 146140	within coordinates
Tssr60337	transcription start site region 60337	25 bp downstream
Tssr60338	transcription start site region 60338	68 bp downstream
Tssr60339	transcription start site region 60339	90 bp downstream
Tssr60340	transcription start site region 60340	125 bp downstream
Tssr60341	transcription start site region 60341	158 bp downstream
Tssr60342	transcription start site region 60342	186 bp downstream
Tssr60343	transcription start site region 60343	223 bp downstream
Tssr60344	transcription start site region 60344	248 bp downstream