rs51264323 SNP Detail

Summary

• ID
  rs51264323
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr19:6919415 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACCAAGATGG TACCCGGACC
  CCGCCCCCTA GCTTCTGTCT GCAGGCCCCG CGCTCCGGCC CGGGGCAGCG TACGCACACC
  TATCCTGGCA GCAGAGGCCC CTGGAGCCCC ACGGCTCGCC TTCCTGGGCG CCCCGTCCCT
  TCTTCCGCAC CCGGGCGGCC ATCCTGCCGT AAAGGAGCTC CCGAAATGGC GCGGGGGGTT
  R
  TCCCCAAGAC GGGCAGTGCA AGGCCTCCAC GATCGGGAAG AAGGAGCTGG TCTTCCCATC
  CCGGTCACTC GGTCCAGGGG GAGCAATAAC CATCGCAACG ACCATTGCAT CCGACGGCCG
  AGCTTCAGTG AACGGCTCTA TAAGTAATCA CTAAGCTGTT TACAGAGTTT TCACCAGCTC
  CCCAGGGAGG TGTCATTAAC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
ss146019400	ENSMUSSNP4991041	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
rs51264323					SNP	G	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr19:6919415 () rs orientation: forward

Symbol	Name	Function Class
Bad	BCL2-associated agonist of cell death	within coordinates
Cpgi10534	CpG island 10534	within coordinates
Gpr137	G protein-coupled receptor 137	within coordinates
Rr405833	regulatory region 405833	384 bp downstream
Rr405834	regulatory region 405834	47 bp downstream
Rr405835	regulatory region 405835	357 bp upstream
Rr543510	regulatory region 543510	within coordinates
Rr543511	regulatory region 543511	162 bp distal
Rr543512	regulatory region 543512	393 bp proximal
Tssr154697	transcription start site region 154697	157 bp downstream
Tssr154698	transcription start site region 154698	115 bp downstream
Tssr154699	transcription start site region 154699	496 bp upstream
Tssr154700	transcription start site region 154700	546 bp upstream
Tssr154701	transcription start site region 154701	576 bp upstream
Tssr157902	transcription start site region 157902	529 bp upstream
Tssr157903	transcription start site region 157903	217 bp upstream
Tssr157904	transcription start site region 157904	359 bp downstream