rs51265007 SNP Detail

Summary

• ID
  rs51265007
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:140543242 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      T CACAGTCCTC CCCACCCCCT GCCCCGGGGT TGTGGTTCAG
  ACAGGTCAAG TAACATTACC AAGGTCACAA AAACTTGTTG CCCACTCCAT GGGCTGGGGT
  R
  CACATGTTGG AGGGGGGGGG AGGTTGCAGG GAATCCAAGG GCAGGGAGAA GAATAAGAAG
  CCATGCTTAT TGCCATGGTT AGGACTCTGC TCCTAGAGTT A                    
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J
ss147713901	ENSMUSSNP5746645	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J
rs51265007					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:140543242 () rs orientation: forward

Symbol	Name	Function Class
Cpgi15197	CpG island 15197	998 bp distal
Gm13032	predicted gene 13032	within coordinates
Padi1	peptidyl arginine deiminase, type I	within coordinates
Rr603557	regulatory region 603557	within coordinates
Rr603558	regulatory region 603558	1644 bp proximal
Tssr44282	transcription start site region 44282	1763 bp upstream