rs51266719 SNP Detail

Summary

• ID
  rs51266719
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:151351566 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAAGCCCGTG GTCTGTGTAC
  AACTCCACAC ATGCCTAAAC TACAACAGTT CTGTGAACCC ATTTTGTCAC AGAAAACTTT
  TATTTCAAAA GCAGAGCCAT GTGAGCACAT TTTACAATGA TCTGTTATAA GACAGGAAAG
  TTTCACATGA AGCAAAACAA AAAAGCTGTT CCTTCACACT CTTTCAGAGT TCAAGAGTTG
  W
  GGTCGAGCTC TGCTTACCTT ACAACTTCAG CTCCAGGGAC ATCTCTCAAG TGCAAAGCAG
  GATGCCAAGG TACAGCAGGG TTGATTTTCC CCTCATACAG GTTTCAGCTG TCAGAGCATC
  CAGCTCCTCT GGAAGAACCA GCCCCCTCTT GCCGAACACC AATAAGGAAG CCACACAGCA
  CATGTGGGCA GAGGCTTCCC                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss144728506	ENSMUSSNP6460107	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs51266719					SNP	A	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:151351566 () rs orientation: forward

Symbol	Name	Function Class
D730045B01Rik	RIKEN cDNA D730045B01 gene	within coordinates
Gm3704	predicted gene 3704	within coordinates
Gm42906	predicted gene 42906	within coordinates
Rr117371	regulatory region 117371	966 bp distal
Rr378823	regulatory region 378823	1416 bp upstream
Tssr54686	transcription start site region 54686	49 bp downstream
Tssr54687	transcription start site region 54687	71 bp downstream