rs51270928 SNP Detail

Summary

• ID
  rs51270928
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:82948448 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGGAATCTGG TTTTACGGGT
  TTGAACTGGA CCTCTAGCCC TCAAATCCTG TCAGTTTGCT ACAGAAGCTA TCACAGGGAA
  AGGAGGAACT CAGTAGTATC CTGTTAAGGA AGAAATGCTG ACTAATGTTA TATAAAATGC
  ATATGATACA TGGGACATAT TACATAATTC ATGTGGAGGG TCATTGAACT CAGAAGTTTG
  M
  ACGTGTTGGG CAAGCACCAT GTGATTTTTT TTTAAAGATC TTTGGGTTAT ATAAGTATCT
  CTTAATAGTT TTTTTTATAT TGCCTGATTA GGTTTCATGA TTATTCTGTG TTCCCACACT
  CGTCCTATTG TGGACTCTCT CTCATTCCCT CCTCTCTTTT TCCCATGCCT TCTCCCTTTA
  CCTCTTAGAT ATAATTTTCT                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss60904295	NES15955662	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	C	C	C	A	A	C	C	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs51270928					SNP	C	C	C	C	C	C	C	C	C	A	A	C	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss60904295	NES15955662	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:82948448 () rs orientation: forward

Symbol	Name	Function Class
M1ap	meiosis 1 associated protein	within coordinates
Rr632712	regulatory region 632712	1478 bp distal
Rr632713	regulatory region 632713	within coordinates
Rr632714	regulatory region 632714	265 bp distal