rs51281996 SNP Detail

Summary

• ID
  rs51281996
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:121581468 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      G TCTTTAAAAA GCTGAACTAC AAGGGAAAAA TGGAACAGTA
  CAAAGATATT GTTTATAGCA ATGATTCTAT CTTAAACAAG AAGTAATTAG GGTACTAAAA
  R
  AAAAAAGAAA AAAAAAGCTT GAAAGAAAAA AAAAAGCTTG TAAGTTTTAG TTAAAATTGA
  TTCACACTAC AGAAGAGCTT TAGCGTTGCC CAAGCTGTGA A                    
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss135729210	ENSMUSSNP3034812	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs51281996					SNP	G	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:121581468 () rs orientation: forward

Symbol	Name	Function Class
4633401B06Rik	RIKEN cDNA 4633401B06 gene	within coordinates
Abcd3	ATP-binding cassette, sub-family D member 3	within coordinates
Tssr35428	transcription start site region 35428	3 bp upstream