rs51282357 SNP Detail

Summary

• ID
  rs51282357
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:134101588 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GCCCTGTGCC TAGGGGGGCC AGAAGAGGGC ATCAGATTCA
  CTGGAACTGA AGTTAGAGAT AATTGCGAGC TGCCATGTGG GTTCTAGGAA CCAAACCTGG
  A
  TTCACTGTAT AAAAAAAAAA AAGAGCTCTG AGCCATTCTT CCAGCCTACC ATCCATACCT
  TTAACCACTA AACAGGCAAT GTGCAGAGTG AGATGGGCC                       
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss147527542	ENSMUSSNP6226571	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs51282357					SNP	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:134101588 () rs orientation: forward

Symbol	Name	Function Class
Extl1	exostosin-like glycosyltransferase 1	1695 bp upstream
Rr601652	regulatory region 601652	1394 bp distal
Rr601653	regulatory region 601653	65 bp distal
Tssr43896	transcription start site region 43896	1716 bp upstream
Tssr43897	transcription start site region 43897	1688 bp upstream