rs51282910 SNP Detail

Summary

• ID
  rs51282910
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  128
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:18092326 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CCTCACACTC CCAAGTTCAT AATAACCCGA GCTTCCTTTT
  TCACTGTACT TTTCACCTTA GTGATTGTTT TCTTATCCTC TGGGATGGAG TCTAAAGGGA
  M
  AATTTATTTA TTTATAGCTC TTGTGAATGT ATATAATAGA TGTATGGAGG TTTCTCTTAT
  ACTATGCAAT CCCCTAATTC CTTGGTCGAT GCCTTCTCTG                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss60545758	NES16558027	PERLEGEN	MM_PANEL2	f	SNP	A	C	A	A	A	A	A	A	A	A
SNP Consensus Information
SNP					Consensus Type	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs51282910					SNP	A	C	A	A	A	A	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss60545758	NES16558027	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:18092326 () rs orientation: forward

Symbol	Name	Function Class
Gm36907	predicted gene, 36907	1543 bp downstream
Rr340653	regulatory region 340653	within coordinates
Tssr5021	transcription start site region 5021	914 bp downstream
Tssr5022	transcription start site region 5022	891 bp downstream
Tssr5023	transcription start site region 5023	357 bp upstream
Tssr142818	transcription start site region 142818	92 bp downstream
Tssr142819	transcription start site region 142819	1675 bp upstream