rs51283256 SNP Detail

Summary

• ID
  rs51283256
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:106804201 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAGCAAACTA GAGGCCACCG
  GATTGTCAGG AAGTCTTGGC CACTTAGGAC TTAGGTTCCT GACTCAGTCA CTGCACTTTG
  ATCTCATTTT TTTAAAACTT ACCTAGCAAC AAAACACATG GTTTAATATT TACCCCCGAC
  TCCTCCCCTT CCCTTTTGTA GTGCCCATCC TAGCTCAAAG AATTTATAAT ATGGTTGACT
  W
  TGAAGAAAAG AAAAGTATAG CTTTACTCAT CTTCATTCCT GGTCATCAGA ATTATAAACC
  TGTTTTTCAG GGCTATTTCA TTTATACTAT TGATGTGGAT GTAATAAAAC TAATACCTAT
  AAGTAAAGAA ACTGTTTAGA AAAAAAATAA ATTATACCAA TGAACCAAGA CTGGAAAAGT
  CTTGAGAGCA ACTAGGGAGG                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss60780037	NES16424388	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	T	A	A	A	A	A	A	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs51283256					SNP	A	A	A	A	A	A	T	A	A	A	A	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss60780037	NES16424388	PERLEGEN	MM_PANEL	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:106804201 () rs orientation: forward

Symbol	Name	Function Class
Rr18766	regulatory region 18766	200 bp distal
Rr371817	regulatory region 371817	330 bp downstream
Serpinb5	serine (or cysteine) peptidase inhibitor, clade B, member 5	within coordinates