rs51286139 SNP Detail

Summary

• ID
  rs51286139
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:129841364 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      A TTCAGGCAGA ACTATAGAAC ATAAATAAAT TTTATGCCTC
  AGTCCAACCT TTCTTCTTAA TAACAGGGAG GAGATGTAGC CTCTCACAAG CCTGAAGCAG
  R
  CTGAGCCAGA CCTTGACTTT GTTGTCACTA AGGAGATTAC GTAGGGTGGA GCCTACCTCC
  CTGGATCACT CTACTGTTCA GCCTCTGCTA CTGCTGCTAC C                    
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
ss147743088	ENSMUSSNP3937765	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
rs51286139					SNP	G	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:129841364 () rs orientation: forward

Symbol	Name	Function Class
Rr385497	regulatory region 385497	within coordinates
Tssr96487	transcription start site region 96487	1134 bp downstream