rs51292621 SNP Detail

Summary

• ID
  rs51292621
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:58736141 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        ATGACTGTGA AGAGACACCA GGACCATGGC AATGCTTTTA
  GAGGAAAACA TTTCATTGAG GCTCATTTAC ACTTTTCAGA GGTTTAGTCC ATTATCATCA
  A
  GGTGGAAAGC ATGGCGGCAT GCAGGTAGAC ATGGTGCTGG AGAAGAAGCT GAGCATTTTC
  CATCTTGCTC CTCAGACAGG AAAAGGAGAC TGCCACACT                       
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss132214904	ENSMUSSNP204767	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs51292621					SNP	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:58736141 () rs orientation: forward

Symbol	Name	Function Class
Cpgi2935	CpG island 2935	1714 bp proximal
Gm12258	predicted gene 12258	1843 bp upstream
Rr246822	regulatory region 246822	1459 bp proximal
Rr402593	regulatory region 402593	1576 bp upstream
Tssr101753	transcription start site region 101753	1838 bp upstream