rs51294306 SNP Detail

Summary

• ID
  rs51294306
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:40505444 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCTGGAGAAA TGGCTCAGCG
  ATTAACACAT GTAATTGCCA GCACCTTCAT CAGGTGGCGC ACCACCACCT ATAACTCCAG
  CTCCAGGACA TCTGGTGCCC TCTTCTGGCC TCCATGGGCA CTGCGTGCAT GTGAGAACAA
  CATGCAATAG ACCACAGACC AACAGACCAC AGCAATTTAA ATGTAAAACA AATCTTTAAG
  M
  TATATTATAG CTATTGTGAT ACAACCAATT ACGTCTCTAG AATCAAATGA CTTTCAGGGA
  GGTTTAATGT GGGCTTTTCC TACTACTGAG CTGTGTGTGT TTCTGAGGAG GTGACACTCA
  GCAAATACCA GTTCCCTTCT ATAAATATTT GGTTCATCCT AACTTATTTT CTGAATAAAT
  TTTCCATCTG CCACCAGGCC                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J
ss147067365	ENSMUSSNP1163237	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J
rs51294306					SNP	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:40505444 () rs orientation: forward

Symbol	Name	Function Class
Ddo	D-aspartate oxidase	563 bp upstream
Rr214674	regulatory region 214674	within coordinates
Rr224698	regulatory region 224698	156 bp proximal
Tssr93026	transcription start site region 93026	539 bp upstream
Tssr93027	transcription start site region 93027	609 bp upstream