rs51302610 SNP Detail

Summary

• ID
  rs51302610
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:32573039 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTCTCATGAA GGCATCATTT
  CTGCCTTATC ATTTTGATCT TGCAAATCCA CATGAAGCTT TGCAGTTATG AACTTGCATT
  TGTCCCGAAT CCCGGTCTTT CTAGCAAATT CTTTTAAAGC AGAAGCTCCG GCTGTTGGGT
  CTCTAAACCT AACTAGGTGT CCTGTGCAGA ACTGAGTCAA GACCGGCAGA ATTGTGTCCC
  K
  TTAGCATGCT AAACGTGACC CCAAAGTGCC TTCAAAGCAG TTCTCAGCTG TTTCTGTGGC
  CCACAGAGGA ATGCTTCCTC CTCCAGGTCT GAGAAGGACT GGGCATGGTG GCCTGCTGTC
  CCAGCACTCA GGAGGCTGAG AACAGGCAGG AAAATCTTGG ATTTGAGGAC ACCCTAGGCA
  ATACAGTGAG ATTCCATCTC                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
ss148200805	ENSMUSSNP1993109	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	G	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
rs51302610					SNP	G	G	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:32573039 () rs orientation: forward

Symbol	Name	Function Class
D5Mit334	DNA segment, Chr 5, Massachusetts Institute of Technology 334	1983 bp proximal
Rr609356	regulatory region 609356	1773 bp distal
Rr609357	regulatory region 609357	746 bp distal
Rr609358	regulatory region 609358	937 bp proximal