rs51307782 SNP Detail

Summary

• ID
  rs51307782
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:26750033 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GCAGT GTGGTTCTGG GACATGAATT
  R
  TGATGTCAGA CACATCTGAG TTCAA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss145405313	ENSMUSSNP1414618	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	G
ss325342252	CHEV_17_26668004	CHEVERUD	SCREENING_POP	f	SNP				A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs51307782					SNP	G	G	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:26750033 () rs orientation: forward

Symbol	Name	Function Class
Gm34606	predicted gene, 34606	within coordinates
Rr329984	regulatory region 329984	1633 bp distal
Tssr143239	transcription start site region 143239	749 bp upstream
Tssr143240	transcription start site region 143240	1820 bp upstream
Tssr143241	transcription start site region 143241	1836 bp upstream
Tssr143242	transcription start site region 143242	1850 bp upstream
Tssr143243	transcription start site region 143243	1875 bp upstream
Tssr143244	transcription start site region 143244	1906 bp upstream
Tssr146959	transcription start site region 146959	623 bp downstream
Tssr146960	transcription start site region 146960	1555 bp downstream
Tssr146961	transcription start site region 146961	1578 bp downstream
Tssr146962	transcription start site region 146962	1606 bp downstream
Tssr146963	transcription start site region 146963	1651 bp downstream