rs51308639 SNP Detail

Summary

• ID
  rs51308639
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:137879815 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GAACT CTATAGCAAG GTGCTATTTT
  T
  CCAAAATGCT CCCCATTCTC AAAGC                                      
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss135949465	ENSMUSSNP90850	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T	T
ss320978682	CHEV_3_137837018	CHEVERUD	SCREENING_POP	f	SNP				T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs51308639					SNP	T	T	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:137879815 () rs orientation: forward

Symbol	Name	Function Class
4930579F01Rik	RIKEN cDNA 4930579F01 gene	Intron
Rr586090	regulatory region 586090	1262 bp distal