rs51311193 SNP Detail

Summary

• ID
  rs51311193
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:141153791 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAAAATGTGG CAGATTAGTT
  CCAGGAATCC ACCCACCCTC GTGTACATTT CACTAATGCT CGGCTCCATT ATATCAAATA
  ACTTAATGTT CACACGTAAT ATAATCTAGA CATATCCTCC TGCAAATGCT CCTTCATCAC
  CAGAAAGCTT ACAATGACCA GTAATACACA AGTGCTATAT AAATAGCTGT TGTGTTATTG
  Y
  TTAGGGGATG ATGAAACACA ACAGGTTGTG ATGCTTTTTC CCTAAATGTT TAGCATCTGT
  ACTTGTTTGT ACAGATGTAG AGCCAGATAT ACACAGTGCA ACATTGTACT ATCTGTAGTG
  GTGTGTGTGT GTGTGTGTGT GTGTGTGTGT GTGTGTGTGT GTGCTTGTGT GTGATCTACT
  TCAAAATTAC CTGAAAATCC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss136004439	ENSMUSSNP5731943	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C	C
ss320992220	CHEV_3_141110994	CHEVERUD	SCREENING_POP	f	SNP				T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs51311193					SNP	T	C	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:141153791 () rs orientation: forward

Symbol	Name	Function Class
Gm66152	predicted gene, 66152	within coordinates
Tssr32030	transcription start site region 32030	1165 bp upstream