rs51313604 SNP Detail

Summary

• ID
  rs51313604
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr18:45352077 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      G GCACTGGCTA CTCCAAGACA GGTGAGAGAA TTCTTGGGCA
  CTGCTGGGTT CTGCAGACTT TGGATACCTG GGTTTACAAC ACTGGCTGCC CCCTTGTACC
  Y
  CCTGACCAAA GAAAGTAGAG AATTCAGATG GACATCAAAA TATCAGAGAG CCTTTGAAAA
  TATTAAAGAG GCTCTGTTGA CTGTGCCAGC CTTGGCATTG C                    
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	MSM/Ms
ss147048595	ENSMUSSNP5855848	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	T
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	MSM/Ms
rs51313604					SNP	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr18:45352077 () rs orientation: forward

Symbol	Name	Function Class
Rr393647	regulatory region 393647	976 bp upstream