rs51315432 SNP Detail

Summary

• ID
  rs51315432
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr10:24793192 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GAAGA GGCAGGAACC AGGAGCCCCG
  M
  TTGCCCTTGC CTTGTGACAT ACTTG                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	LG/J	SM/J
ss146998925	ENSMUSSNP1524928	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	C
ss323275275	CHEV_10_24637100	CHEVERUD	SCREENING_POP	f	SNP			C	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	LG/J	SM/J
rs51315432					SNP	A	C	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:24793192 () rs orientation: forward

Symbol	Name	Function Class
Arg1	arginase, liver	Intron
Tssr92746	transcription start site region 92746	1657 bp downstream
Tssr92747	transcription start site region 92747	1567 bp downstream
Tssr97085	transcription start site region 97085	1801 bp upstream
Tssr97086	transcription start site region 97086	1739 bp upstream
Tssr97087	transcription start site region 97087	1713 bp upstream
Tssr97088	transcription start site region 97088	1653 bp upstream
Tssr97089	transcription start site region 97089	1638 bp upstream
Tssr97090	transcription start site region 97090	1607 bp upstream
Tssr97091	transcription start site region 97091	1212 bp upstream
Tssr97092	transcription start site region 97092	1193 bp upstream
Tssr97093	transcription start site region 97093	1166 bp upstream
Tssr97094	transcription start site region 97094	1155 bp upstream
Tssr97095	transcription start site region 97095	1138 bp upstream
Tssr97096	transcription start site region 97096	853 bp upstream
Tssr97097	transcription start site region 97097	606 bp upstream
Tssr97098	transcription start site region 97098	447 bp upstream
Tssr97099	transcription start site region 97099	653 bp downstream
Tssr97100	transcription start site region 97100	691 bp downstream