rs51318535 SNP Detail

Summary

• ID
  rs51318535
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:61501380 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAAATGGTGT CTTCTGGTAC
  GAAAAAGCAT CTGTCCCCAC AAAGAACTCA TTCATACAAA CACACAACTT ACAAATAATT
  GACAATAATA TTTTGTAAAG GTAAGAGGTT TTCCCAGTCA AACTCTAATC ACAGAAACCA
  GGACATAACT GGAATGAACT GCATAAGCTT AACACCAAAA TAGAAAATTC TAGGATCAGA
  R
  AAATTTGAGC CTTGTACATG AGATGAGAAA GCACTGAGGA AGACAACTGA TATCAATATC
  ACACCCCCAC ACTCACATAC ACATAAATTT GAACAACAAA AAAGAACATG TTCTTTTTTC
  AATTTAATGC AACAATGCGT TCTGTGACTA GTATCTAAAA ATCCAACTGC CAATAGAAAA
  TCCATCCGGA TCTTAAAATC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	CAST/EiJ	FVB/NJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss61823448	NES17746816	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	CAST/EiJ	FVB/NJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs51318535					SNP	A	A	A	A	A	A	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss61823448	NES17746816	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:61501380 () rs orientation: forward

Symbol	Name	Function Class
Cts7	cathepsin 7	within coordinates