rs51325113 SNP Detail

Summary

• ID
  rs51325113
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:141430603 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTGGAAGAAT TGCAACACTG
  CTGATTCCTT CATGGTGACC CAATGAAATA ATTTCAAGTC TCAGCTGTTG AGAGCTGTAT
  GATGGGCCTG TGCCAACAGG GAAGGGCTAT ACCCACCATG CACCTGCCAT TCCAATTTCA
  CATGTGGAGT GGTATACTCT AAGTAAATGT AAGTTTGAAT AATTAAATTC ACATCTCGAA
  W
  TCTCAGATAT ATAATACATA AGGTCATTAG ACTAGACTAT GAGAGTTGAA AGGTTTTCCT
  CCTAAGAGAA ATAGTCCCCC AGTCCTTCAC CAAGGAATGC TGTGAGATTA TGTTGGGGCA
  TTTAATTCAA ATCCATATTT TCTGAGGAGC TACTCTATAA AATACACCAT GCATAAAAGT
  ATATCCAACC TCAGAACATT                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss61091306	NES16613425	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	A	A	A	A	A	A	A	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs51325113					SNP	A	A	A	A	A	A	A	A	A	A	A	A	A	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss61091306	NES16613425	PERLEGEN	MM_PANEL	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:141430603 () rs orientation: forward

Symbol	Name	Function Class
Rr74631	regulatory region 74631	694 bp proximal
Unc5c	unc-5 netrin receptor C	within coordinates